Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854632.1_cds_XP_016512617.1_25243
CDS Infomation

[gene=LOC107829673] [db_xref=GeneID:107829673] [protein=transcription initiation factor TFIID subunit 5-like] [protein_id=XP_016512617.1] [location=join(159..245,392..489,889..1012,1201..1352,2104..2214,2299..2368,2467..2562,4125..4224,4366..4442,4876..4992,6147..6412,6532..6627,6709..6784,6865..6918)] [gbkey=CDS]
Sequence

ATGAGAGAAGTCCTGGGTGATCATTGCTCCGATGCTTCGGGTGAAACCAATTCCCAAGGT
GTGACAGGCGGCGTGTACAAGGCCCTGTGCTGCTATGTTACTTGGACTAAGCGTTTTGGC
CAAATGCCTGGTGTTGACATGACACCTGGTGCGGGTGGAATTCATGTTGGATCTGGTCAA
ATAAGATTTAACTTGTGGCAGCTGCTTGAAGACTCTTTAGAAGAACGGTTAGAAAAGACA
GGAGGTATGGTTCCAGATTCGGAAAAGTTTGATGGAGATCCTAAGGAAGGAGAAGTGGAA
GAAAACAAGAAGAAGTCAGTTGAAGGTGGAAAGCAAGGCGCATCTCTTAAAAAGCAAAAG
AAGGACAAAGTTGGGGTTGCAACAGGAAAATCTTCTCGTACAGAGGGCAGCACAGTGACA
ACTGCACCACGTGTCAAACCGGAACTTGCTTTACCTGCTATTCCTGCAGAGGTAGAACAT
TCTATTCTGGAAGACTTGAGGAACCGTGTGCAGTTGAGTAATGCAGCATTGCCCTCTGTT
AGCTTCTATACATTTGTTAATACACATAATGGACTAAACTGTGCATCAATATCACACGAC
GGATCACTCGTGGCTGGTGGATTCTCAGACTCGTCTTTGAAGGTTTGGGACATGGCAAAG
CTTGGGCAACAAACTGGTCCATGTAAGTCCAACATGATAGTCCTTCCCAATGCTATTGCT
ATTTTCATGTTTCAAGATATGCCAGGAAGGGATTCTTTTGTGGAGCTCANCCCTGTTTAT
TCTGCGTCCTTTAGTCCGTACGGGGATTTTCTTCTATCTTCTTCATCAGATTCAACAATT
CGCTTATGGAGTACAAGGTTAAATGCTAATCTTGTTTGCTACAAAGGCCACAATTACCCA
GTATGGGATGTTCAGTTTAGTCCAGTTGGTCATTATTTTGCCAGTTGTTCACATGACCGC
ACTGCAAGAATCTGGTCTATGGACAGAATACAGCCTCTGAGAATAATGGCCGGACACTTA
TCAGATGTGGATTGTGTGCAATGGCATGCAAACTGCAATTACATTGCAACTGGATCAAGT
GACAAAACTGTACGCTTGTGGGATGTCCAAAGTGGCGACTGTGTCAGGATTTTCATTGGT
CATAGGAGTATGATCCTGTCATTGGCAATGTCTCCTGATGGTCGATATATGGCATCAGGT
GATGAAGATGGAACAGTCATGATGTGGGATCTCTCAAGTGGACGTTGTATTACTCCTTTG
GTTGGACACTCCTCCTGTGTATGGTCACTTGCTTTTAGTGGTGAAGGTTCACTTCTTGCA
TCTGGCTCTGCTGATTGCACTGTGAAATTATGGGATGTAACCACAAGCACAAAAGCGCCA
CTGAAAGAAGAGAACAAACCTGGAATTAACAATAGGCTTCGATCATTGAAGACCCTGCCG
ACAAAAGCTACTCCAGTCTATGCTCTGCGCTTTTCTCGAAGAAATCTTCTATTTGCTGCT
GGAGCTTTCTCGAAGGGTGCATGA

Peptide Sequence

PEP ID

XP_016512617.1
PEP Infomation

PREDICTED: transcription initiation factor TFIID subunit 5-like [Nicotiana tabacum]
Sequence

MREVLGDHCSDASGETNSQGVTGGVYKALCCYVTWTKRFGQMPGVDMTPGAGGIHVGSGQ
IRFNLWQLLEDSLEERLEKTGGMVPDSEKFDGDPKEGEVEENKKKSVEGGKQGASLKKQK
KDKVGVATGKSSRTEGSTVTTAPRVKPELALPAIPAEVEHSILEDLRNRVQLSNAALPSV
SFYTFVNTHNGLNCASISHDGSLVAGGFSDSSLKVWDMAKLGQQTGPCKSNMIVLPNAIA
IFMFQDMPGRDSFVELXPVYSASFSPYGDFLLSSSSDSTIRLWSTRLNANLVCYKGHNYP
VWDVQFSPVGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSS
DKTVRLWDVQSGDCVRIFIGHRSMILSLAMSPDGRYMASGDEDGTVMMWDLSSGRCITPL
VGHSSCVWSLAFSGEGSLLASGSADCTVKLWDVTTSTKAPLKEENKPGINNRLRSLKTLP
TKATPVYALRFSRRNLLFAAGAFSKGA

Transcript Sequence

Gene sequence data has not been registered.